The detailed information of tRNA gene sequence


Sequence ID>WENV170672019
Genome IDLAHU01272838
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 747
End posion on genome 825
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gacgtgttaT
tRNA gene sequence 
GGGCCTGTAGTCTAGCCGGGAATATGACGTGGGACTTCGGATCCCAAGGTCGGGGGTTCA
AATCCCCCCAGGTCCGTCt
Downstream region at tRNA end position 
attttttact
Secondary structure (Cloverleaf model)
>WENV170672019	Arg	TCG
                   T      GTCt attttttact
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C C C C     A
    C C G A        A      | | | | |     A
  G         T C T G       G G G G G     C
  G           | | |                 T T
  G         T G A C
    A A T A        G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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