The detailed information of tRNA gene sequence


Sequence ID>WENV170672034
Genome IDLAHU01279001
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 89
End posion on genome 17
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
actatttaag
tRNA gene sequence
GGGCCCGTGGCTTAGGCGGTAGAGCGCACGGCTGATAACCGTGAGGTCCTGGGTTCGAAT
CCCAGCGGGCCCAtta
Downstream region at tRNA end position
ttacatcaac
Secondary structure (Cloverleaf model)
>WENV170672034	Ile	GAT
                   g      Atta ttacatcaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
      G G A        G      | | | | |     G
    C       T T C G       C T G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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