The detailed information of tRNA gene sequence


Sequence ID>WENV170672128
Genome IDLAZR01000004
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 545472
End posion on genome 545382
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcccgatttt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATAGGTTAATCCCCT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tattaaatat
Secondary structure (Cloverleaf model)
>WENV170672128	Ser	GCT
                   t      GCCA tattaaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGTTAATCCCCTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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