The detailed information of tRNA gene sequence


Sequence ID>WENV170672131
Genome IDLAZR01000004
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 186277
End posion on genome 186201
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gctcgatttt
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGCACTACACTGGGGGTGTAGGGGTCGCAGGTTCAAA
TCCTGCCGTTCCGACCA
Downstream region at tRNA end position 
aatacagggc
Secondary structure (Cloverleaf model)
>WENV170672131	Pro	GGG
                   t      ACCA aatacagggc
                     C - G
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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