The detailed information of tRNA gene sequence


Sequence ID>WENV170672139
Genome IDLAZR01000005
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 379654
End posion on genome 379741
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaaaaatgt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTAAGTCGTAAGGCTTC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
agaatataga
Secondary structure (Cloverleaf model)
>WENV170672139	Ser	GGA
                   t      GCCA agaatataga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TAAGTCGTAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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