The detailed information of tRNA gene sequence


Sequence ID>WENV170672161
Genome IDLAZR01000011
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 38288
End posion on genome 38378
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaggtaactt
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACCCCAAAAGGGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCAA
Downstream region at tRNA end position 
gtaagtttta
Secondary structure (Cloverleaf model)
>WENV170672161	Ser	GGA
                   t      GCAA gtaagtttta
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCCCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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