The detailed information of tRNA gene sequence


Sequence ID>WENV170672304
Genome IDLAZR01000056
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 73987
End posion on genome 73895
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgccgttaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTTATAGCC
CTATCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
actgcacgtt
Secondary structure (Cloverleaf model)
>WENV170672304	Ser	GCT
                   a      GCCA actgcacgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTATAGCCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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