The detailed information of tRNA gene sequence


Sequence ID>WENV170672309
Genome IDLAZR01000058
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 44774
End posion on genome 44700
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgccaaggcg
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCACCTCGTTCACACCGAGGGGGTCACAGGTTCAATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
tttctttcag
Secondary structure (Cloverleaf model)
>WENV170672309	Val	CAC
                   g      ACCA tttctttcag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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