The detailed information of tRNA gene sequence


Sequence ID>WENV170672339
Genome IDLAZR01000065
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 149328
End posion on genome 149404
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcatggcatc
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAA
TCCTGCCGCTCCGACCA
Downstream region at tRNA end position 
tcgcgatccg
Secondary structure (Cloverleaf model)
>WENV170672339	Pro	TGG
                   c      ACCA tcgcgatccg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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