The detailed information of tRNA gene sequence


Sequence ID>WENV170672449
Genome IDLAZR01000174
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 52348
End posion on genome 52421
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcgccggtga
tRNA gene sequence 
GGCCTCGTGGCGGAGTGGTTACGCAGAGGACTGCAAATCCTTGTACGGGGGTTCGATTCC
CTCCGAGGCCTCCA
Downstream region at tRNA end position 
ttcccatccc
Secondary structure (Cloverleaf model)
>WENV170672449	Cys	GCA
                   a      TCCA ttcccatccc
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      T     G G C G       G G G G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GTAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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