The detailed information of tRNA gene sequence


Sequence ID>WENV170672623
Genome IDLAZR01000484
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 7294
End posion on genome 7202
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttatgcgtt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCCGAAGGAGCTCCCCTGCTAAGGGAGTATAGAGTTTGTAGCT
CTATCGAGGGTTCGAATCCCTCCCTCTCCACCA
Downstream region at tRNA end position 
tacttaattt
Secondary structure (Cloverleaf model)
>WENV170672623	Ser	GCT
                   t      ACCA tacttaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATAGAGTTTGTAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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