The detailed information of tRNA gene sequence


Sequence ID>WENV170672913
Genome IDLAZR01003178
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 8465
End posion on genome 8378
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggtgttaatt
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCTTGGAAAGCGTGTAAACGGCAACGTTTC
GAGGGTTCGAATCCCTTCCTCTCTGCTA
Downstream region at tRNA end position 
aaacgaaaag
Secondary structure (Cloverleaf model)
>WENV170672913	Ser	GGA
                   t      GCTA aaacgaaaag
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAACGGCAACGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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