The detailed information of tRNA gene sequence


Sequence ID>WENV170673065
Genome IDLAZR01005407
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 4849
End posion on genome 4939
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaggttatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTAAACGTTAATAGCGT
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
attaaaaacc
Secondary structure (Cloverleaf model)
>WENV170673065	Ser	GGA
                   t      GCCA attaaaaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAACGTTAATAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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