The detailed information of tRNA gene sequence


Sequence ID>WENV170673364
Genome IDLAZR01012221
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 3124
End posion on genome 3048
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagttttatt
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCCTAGGTTCAAG
TCCTAGTGGGCCCACCA
Downstream region at tRNA end position 
ataatatcaa
Secondary structure (Cloverleaf model)
>WENV170673364	Met	CAT
                   t      ACCA ataatatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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