The detailed information of tRNA gene sequence


Sequence ID>WENV170673521
Genome IDLAZR01016639
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 2772
End posion on genome 2696
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnntg
tRNA gene sequence 
GGGCCCGTAACTCAGCTTGGTAGAGTAACCGGCTCATAACCGGTGAGCCAAGGGATCGAA
GCCCTTCGGGCCCACCA
Downstream region at tRNA end position 
aattcaatta
Secondary structure (Cloverleaf model)
>WENV170673521	Met	CAT
                   g      ACCA aattcaatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          G A
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C A       A A G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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