The detailed information of tRNA gene sequence


Sequence ID>WENV170673927
Genome IDLAZR01035050
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 1189
End posion on genome 1111
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttttaccta
tRNA gene sequence 
GCTCCTGTGGTGTAGTCCGGCTAAGCATACTGCCCTCTCAAGGCAGTGATCTCGGGTTCA
AATCCCGACGGGAGCACCT
Downstream region at tRNA end position 
tagaatttct
Secondary structure (Cloverleaf model)
>WENV170673927	Glu	CTC
                   a      ACCT tagaatttct
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     A G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    C T A A        A     TGATC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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