The detailed information of tRNA gene sequence


Sequence ID>WENV170674178
Genome IDLAZR01048822
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 31
End posion on genome 120
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcatcaac
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCGCTCCGCCA
Downstream region at tRNA end position 
ttacattttt
Secondary structure (Cloverleaf model)
>WENV170674178	Ser	GGA
                   c      GCCA ttacattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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