The detailed information of tRNA gene sequence


Sequence ID>WENV170674702
Genome IDLCWY01000527
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 3016
End posion on genome 3103
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ataaacgtgt
tRNA gene sequence 
GCCCGGATGGTGGAATTGGTAGACACCCAGGACTTAAAATCCTGTGGCCATTGCGGCCGT
GCCGGTTCGAGCCCGGCTCCGGGTACCA
Downstream region at tRNA end position 
ttcaagagcc
Secondary structure (Cloverleaf model)
>WENV170674702	Leu	TAA
                   t      ACCA ttcaagagcc
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          C G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        C     TGGCCATTGCGGCCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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