The detailed information of tRNA gene sequence


Sequence ID>WENV170674713
Genome IDLCWY01000946
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 887
End posion on genome 815
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
cctttgcacg
tRNA gene sequence 
GTCCCGGTAGGGTAGTGGATATCCTAGAAGCCTGCGGAGCTTTTGACCCGGGTTCAAGTC
CCGGCCGGGGCGCtt
Downstream region at tRNA end position 
cgacccattt
Secondary structure (Cloverleaf model)
>WENV170674713	Arg	GCG
                   g      GCtt cgacccattt
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       T G G G       C C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          A     TGAC
                    G + T
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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