The detailed information of tRNA gene sequence


Sequence ID>WENV170674720
Genome IDLCWY01000953
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2535
End posion on genome 2461
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caccaattga
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTCATTCCCCAGTTCAAATC
TGGGTGCCGCCTCCA
Downstream region at tRNA end position 
tttttacaca
Secondary structure (Cloverleaf model)
>WENV170674720	Cys	GCA
                   a      TCCA tttttacaca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     A
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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