The detailed information of tRNA gene sequence


Sequence ID>WENV170674732
Genome IDLCWY01001066
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2269
End posion on genome 2194
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agggtaccaa
tRNA gene sequence 
GGGCGAATAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCGAGA
CCTGTTTCGCCCACCA
Downstream region at tRNA end position 
tttgcgggga
Secondary structure (Cloverleaf model)
>WENV170674732	Val	TAC
                   a      ACCA tttgcgggga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          A G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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