The detailed information of tRNA gene sequence


Sequence ID>WENV170674747
Genome IDLCWY01001661
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 203
End posion on genome 279
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tggaattacT
tRNA gene sequence 
GGGCTTGTGGTCTAGCTGGTTATGACGTCGCCCTTACACGGCGAAGATCTCCGGTTCGAA
TCCGGACAGGCCCATCt
Downstream region at tRNA end position 
tcttttcgat
Secondary structure (Cloverleaf model)
>WENV170674747	Val	TAC
                   T      ATCt tcttttcgat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     A G G C C     A
      C G A        G      | | | | |     G
    T       T C T G       T C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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