The detailed information of tRNA gene sequence


Sequence ID>WENV170674803
Genome IDLCWY01004903
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 949
End posion on genome 875
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caaccaaagt
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
taaatatggg
Secondary structure (Cloverleaf model)
>WENV170674803	Glu	TTC
                   t      ACCA taaatatggg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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