The detailed information of tRNA gene sequence


Sequence ID>WENV170674804
Genome IDLCWY01004903
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 867
End posion on genome 792
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ccataaatat
tRNA gene sequence 
GGGCGAATAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCAAGT
CCTGTTTCGCCCACCA
Downstream region at tRNA end position 
tattagatat
Secondary structure (Cloverleaf model)
>WENV170674804	Val	TAC
                   t      ACCA tattagatat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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