The detailed information of tRNA gene sequence


Sequence ID>WENV170674810
Genome IDLCWY01006172
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 311
End posion on genome 386
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
agaagagtat
tRNA gene sequence 
GCCCAAATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCCGTGGTTCGATT
CCGCGTTTGGGCACCA
Downstream region at tRNA end position 
aaaagaagca
Secondary structure (Cloverleaf model)
>WENV170674810	Phe	GAA
                   t      ACCA aaaagaagca
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T T
                    T     G C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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