The detailed information of tRNA gene sequence


Sequence ID>WENV170674821
Genome IDLCWY01007256
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 70
End posion on genome 144
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctggagccaa
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTATCAGGGGTTCGAGTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
aacaaacgtc
Secondary structure (Cloverleaf model)
>WENV170674821	Glu	TTC
                   a      ACCA aacaaacgtc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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