The detailed information of tRNA gene sequence


Sequence ID>WENV170674841
Genome IDLCWY01008653
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 581
End posion on genome 655
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctatcagtga
tRNA gene sequence 
GGGGTCGTGGGGTAGCCTGGACTATCCTATTGCGTTCGGGACGCAGTGACCTGAGTTCGA
ATCTCAGCGACCCCAttt
Downstream region at tRNA end position 
ctgttcaaca
Secondary structure (Cloverleaf model)
>WENV170674841	Pro	CGG
                   a      Attt ctgttcaaca
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        G      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    A C T A        A     TGAC
                    T + G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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