The detailed information of tRNA gene sequence


Sequence ID>WENV170674883
Genome IDLCWY01018225
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 414
End posion on genome 338
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTACCTGACTACGAATCAGGAGGTCGGAGGTTCGAA
TCCTCCCGGGCGCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170674883	Arg	ACG
                   t      GCCA tttttatttt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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