The detailed information of tRNA gene sequence


Sequence ID>WENV170674889
Genome IDLCWY01018670
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 121
End posion on genome 46
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aataatttat
tRNA gene sequence 
GGGCGAATAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCAAGT
CCTGTTTCGCCCACCA
Downstream region at tRNA end position 
ttttcaatta
Secondary structure (Cloverleaf model)
>WENV170674889	Val	TAC
                   t      ACCA ttttcaatta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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