The detailed information of tRNA gene sequence


Sequence ID>WENV170674964
Genome IDLCWZ01000076
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 11805
End posion on genome 11879
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acaataagca
tRNA gene sequence 
GGCCCGTTCGTCTAGGGGTTAGGACGCCAGGTTTTCATCCTGGTAGCAGGGGTTCGAATC
CCCTACGGGCTACTA
Downstream region at tRNA end position 
aaaacaagtt
Secondary structure (Cloverleaf model)
>WENV170674964	Glu	TTC
                   a      ACTA aaaacaagtt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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