The detailed information of tRNA gene sequence


Sequence ID>WENV170675006
Genome IDLCWZ01000508
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 14
End posion on genome 89
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
agaagagtat
tRNA gene sequence 
GCCCAAATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCCGTGGTTCGATT
CCGCGTTTGGGCACCA
Downstream region at tRNA end position 
aaaagaagca
Secondary structure (Cloverleaf model)
>WENV170675006	Phe	GAA
                   t      ACCA aaaagaagca
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T T
                    T     G C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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