The detailed information of tRNA gene sequence


Sequence ID>WENV170675026
Genome IDLCWZ01001025
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 1158
End posion on genome 1071
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ataaacgtgt
tRNA gene sequence 
GCCCGGATGGTGGAATTGGTAGACACCCAGGACTTAAAATCCTGTGGCCATTGCGGCCGT
GCCGGTTCGAGCCCGGCTCCGGGTACCA
Downstream region at tRNA end position 
ttcaagagcc
Secondary structure (Cloverleaf model)
>WENV170675026	Leu	TAA
                   t      ACCA ttcaagagcc
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          C G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        C     TGGCCATTGCGGCCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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