The detailed information of tRNA gene sequence


Sequence ID>WENV170675027
Genome IDLCWZ01001027
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2182
End posion on genome 2254
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
cctttgcacg
tRNA gene sequence 
GTCCCGGTAGGGTAGTGGATATCCTAGAAGCCTGCGGAGCTTTTGACCCGGGTTCAAGTC
CCGGCCGGGGCGCtt
Downstream region at tRNA end position 
cgacccattt
Secondary structure (Cloverleaf model)
>WENV170675027	Arg	GCG
                   g      GCtt cgacccattt
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       T G G G       C C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          A     TGAC
                    G + T
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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