The detailed information of tRNA gene sequence


Sequence ID>WENV170675093
Genome IDLCWZ01005431
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 1133
End posion on genome 1058
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aacataacat
tRNA gene sequence 
GCTGGTGTAGCTCAATTGGCAGAGCAGCTGATTTGTAATCAGCAGGTTGCGGGTTCGAGT
CCCATCACCAGCTCCA
Downstream region at tRNA end position 
tgaagtggag
Secondary structure (Cloverleaf model)
>WENV170675093	Thr	TGT
                   t      TCCA tgaagtggag
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      T A A        A      +   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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