The detailed information of tRNA gene sequence


Sequence ID>WENV170675099
Genome IDLCWZ01005579
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 959
End posion on genome 1035
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aacttatgat
tRNA gene sequence 
AGTCCCGTAGCTCAGTTGGTTAGAGCACTACACTGATAATGTAGGGGTCAGCAGTTCAAA
TCTGCTCGGGACTACAA
Downstream region at tRNA end position 
ggttagcggg
Secondary structure (Cloverleaf model)
>WENV170675099	Ile	GAT
                   t      ACAA ggttagcggg
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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