The detailed information of tRNA gene sequence


Sequence ID>WENV170675100
Genome IDLCWZ01005579
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 1043
End posion on genome 1117
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaggttagc
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAC
TCCGATATTCTCCACtg
Downstream region at tRNA end position 
ggaagtaaga
Secondary structure (Cloverleaf model)
>WENV170675100	Ala	TGC
                   c      ACtg ggaagtaaga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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