The detailed information of tRNA gene sequence


Sequence ID>WENV170675116
Genome IDLCWZ01007249
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 936
End posion on genome 860
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttgataaaat
tRNA gene sequence 
AGTCCCGTAGCTCAGTTGGTTAGAGCACTACACTGATAATGTAGGGGTCAGCAGTTCAAA
TCTGCTCGGGACTACAA
Downstream region at tRNA end position 
tgttagcggg
Secondary structure (Cloverleaf model)
>WENV170675116	Ile	GAT
                   t      ACAA tgttagcggg
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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