The detailed information of tRNA gene sequence


Sequence ID>WENV170675170
Genome IDLCWZ01011728
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 770
End posion on genome 695
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccatatatga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAAT
CCTGTCCCCGCAACCA
Downstream region at tRNA end position 
aaacaaaaag
Secondary structure (Cloverleaf model)
>WENV170675170	Met	CAT
                   a      ACCA aaacaaaaag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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