The detailed information of tRNA gene sequence


Sequence ID>WENV170675177
Genome IDLCWZ01011728
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 115
End posion on genome 40
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
agaagagtat
tRNA gene sequence 
GCCCAAATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCCGTGGTTCGATT
CCGCGTTTGGGCACCA
Downstream region at tRNA end position 
aaaagaagca
Secondary structure (Cloverleaf model)
>WENV170675177	Phe	GAA
                   t      ACCA aaaagaagca
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T T
                    T     G C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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