The detailed information of tRNA gene sequence


Sequence ID>WENV170675193
Genome IDLCWZ01014065
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 166
End posion on genome 90
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgtgaccaat
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAA
TCTGCCCAGACCCACCA
Downstream region at tRNA end position 
aatttgcgtg
Secondary structure (Cloverleaf model)
>WENV170675193	Ile	GAT
                   t      ACCA aatttgcgtg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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