The detailed information of tRNA gene sequence


Sequence ID>WENV170675200
Genome IDLCWZ01015571
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 142
End posion on genome 67
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cggcggcttc
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCACCGGTTCGATC
CCGGTAGGCTCCACCA
Downstream region at tRNA end position 
tccaggtggc
Secondary structure (Cloverleaf model)
>WENV170675200	Ala	TGC
                   c      ACCA tccaggtggc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T G G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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