The detailed information of tRNA gene sequence


Sequence ID>WENV170675227
Genome IDLCWZ01018657
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 312
End posion on genome 387
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
atatacttac
tRNA gene sequence 
GCCCAAATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCCGTGGTTCGATT
CCGCGTTTGGGCACCA
Downstream region at tRNA end position 
gttagatcat
Secondary structure (Cloverleaf model)
>WENV170675227	Phe	GAA
                   c      ACCA gttagatcat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T T
                    T     G C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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