The detailed information of tRNA gene sequence


Sequence ID>WENV170675292
Genome IDLCWZ01032318
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 100
End posion on genome 24
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aagcaaattt
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCATCGGTTCAAG
TCCGATATTCTCCACCA
Downstream region at tRNA end position 
tatgattatt
Secondary structure (Cloverleaf model)
>WENV170675292	Ala	TGC
                   t      ACCA tatgattatt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T G
                    T     T A G C C     A
      C G A        A      | | | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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