The detailed information of tRNA gene sequence


Sequence ID>WENV170675295
Genome IDLCWZ01034581
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 26
End posion on genome 102
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agaaacataa
tRNA gene sequence 
TCCTCCTTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCCTGGTTCGAG
TCCAGGAGGGGGAGCCA
Downstream region at tRNA end position 
tcaaggacaa
Secondary structure (Cloverleaf model)
>WENV170675295	Asn	GTT
                   a      GCCA tcaaggacaa
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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