The detailed information of tRNA gene sequence


Sequence ID>WENV170675338
Genome IDLCWZ01042818
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 345
End posion on genome 271
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttaaaagcat
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
aagtgggagc
Secondary structure (Cloverleaf model)
>WENV170675338	Glu	TTC
                   t      ACCA aagtgggagc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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