The detailed information of tRNA gene sequence


Sequence ID>WENV170675346
Genome IDLCWZ01044237
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 367
End posion on genome 292
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctcaggatga
tRNA gene sequence 
GGGGGCGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGGAGTTCAAAT
CTCCTCGTCTCCACCA
Downstream region at tRNA end position 
gaatccttat
Secondary structure (Cloverleaf model)
>WENV170675346	Ala	TGC
                   a      ACCA gaatccttat
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T C C T C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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