The detailed information of tRNA gene sequence


Sequence ID>WENV170675400
Genome IDLCWZ01060608
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 266
End posion on genome 342
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
acgggaatat
tRNA gene sequence 
TCCTCCTTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCGAG
TCCAAGAGGGGGAGCAA
Downstream region at tRNA end position 
gagaaaaann
Secondary structure (Cloverleaf model)
>WENV170675400	Asn	GTT
                   t      GCAA gagaaaaann
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     G A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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