The detailed information of tRNA gene sequence


Sequence ID>WENV170675440
Genome IDLCWZ01072728
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 235
End posion on genome 310
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggaccagagt
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGGCGGTTCGATT
CCGCCTGGCTCCACCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170675440	Ala	GGC
                   t      ACCA annnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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