The detailed information of tRNA gene sequence


Sequence ID>WENV170675477
Genome IDLCWZ01088385
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 102
End posion on genome 26
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cgcgcagcgt
tRNA gene sequence 
CGGGCTATGGCGCAGTCTGGTAGCGCGTCCGTCTGGGGGGCGGAAGGTCGCAGGTTCAAG
TCCTGCTAGCCCGACCA
Downstream region at tRNA end position 
tttcatctga
Secondary structure (Cloverleaf model)
>WENV170675477	Pro	GGG
                   t      ACCA tttcatctga
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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