The detailed information of tRNA gene sequence


Sequence ID>WENV170675482
Genome IDLCWZ01090305
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 153
End posion on genome 227
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccgaaagcgt
tRNA gene sequence 
GGCCCGTTCGTCTATCGGTTAGGACACCAGGTTTTCAACCTGGGAAGAGGGGTTCGACTC
CCCTACGGGCTGCCA
Downstream region at tRNA end position 
cttcaccaac
Secondary structure (Cloverleaf model)
>WENV170675482	Glu	TTC
                   t      GCCA cttcaccaac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     GAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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